gdata.GenomeDataBuilder#

class gdata.GenomeDataBuilder(self, /, location, genome_fasta, *, window_size=524288, step_size=None, chunk_size=128, resolution=1, chroms=None)#

Represents a builder for genomic data, allowing for the creation and management of genomic datasets.

This struct provides methods to create a new genomic dataset, open an existing dataset, and manage genomic data chunks. It supports operations like adding files, retrieving chromosome information, and iterating over data chunks.

Methods

add_file(key, w5z)

add_files(files)

chroms()

open()